引用本文: | 张永? 刘雅? 陆海, 李慧. 转录组分析组蛋白去乙酰化酶抑制剂TSA对毛白杨悬浮细胞表达谱的影响[J]. 北京林业大学学报, 2018, 40(9): 1-14.doi:10.13332/j.1000-1522.20180158 |
Citation: | Zhang Yongzhuo, Liu Yalin, Lu Hai, Li Hui. Transcriptome analysis of gene expression profiling in the suspension cells ofPopulus tomentosatreated by histone deacetylase inhibitor TSA[J].Journal of Beijing Forestry University, 2018, 40(9): 1-14.doi:10.13332/j.1000-1522.20180158 |
?nbsp; 1TSA处理和对照组毛白杨悬浮细胞形态观寞/p>
A.培养10 d的对照组悬浮细胞;B.TSA处理培养10 d的悬浮细胞;C.对照组悬浮细胞形态图(光镜20x);D.TSA处理的悬浮细胞形态图(光镜20x);E.碘化丙啶(PI)染色后对照组悬浮细胞形态图(荧光20x);F.碘化丙啶(PI)染色后TSA处理的悬浮细胞形态图(荧光20x)、/p>
Figure 1.Cell morphological observation of TSA-treated and control group suspension cells inPopulus tomentosa
A, suspension cells cultured for 10 days in the control group; B, suspension cells treated by TSA for 10 days; C, cell morphology of suspension culture in the control group under light microscopy (20x); D, cell morphology of TSA-treated suspension culture under light microscopy (20x); E, cell morphology of suspension culture in the control group stained by PI in control under fluorescence microscopy (20x); F, cell morphology of TSA-treated suspension culture stained by PI under fluorescence microscopy (20x).
?nbsp; 2差异表达基因的火山图
x.差异倍数;y.校正后的P值。下 3同此、br/>红点表示显著性差异表达的上调基因,绿点表示显著性差异表达的下调基因,蓝点表示无显著性差异表达的基因、/p>
Figure 2.Volcano map of differentially expressed genes
Red dots indicate significantly up-regulated differentially expressed genes, green dots indicate significantly down-regulated differentially expressed genes. Blue dots indicate non-significantly differentially expressed genes.x, fold change;y,P-adjusted value. The same below inTab. 3.
?nbsp; 3差异基因GO功能富集
Biological process, 生物过程; Molecular function, 分子功能; Cellular component, 细胞组成; Oxidation-reduction process, 氧化还原过程; Photosynthesis, 光合作用; Negative regulation of peptidase activity, 肽酶活性负调控; Negative regulation of endopeptidase activity, 肽链内切酶活性的负调芁 Regulation of endopeptidase activity, 肽链内切酶活性的调节; regulation of peptidase activity, 肽酶活性的调节; Negative regulation of hydrolase activity, 水解酶活性负调控; Negative regulation of proteolysis, 蛋白水解酶活性负调控; Single-organism metabolic process, 单体代谢过程; Response to wounding, 损伤反应; Carbohydrate metabolic process, 糖代谢过稊 Negative regulation of cellular protein metabolic process, 细胞蛋白质代谢过程的负调? Negative regulation of protein metabolic process, 蛋白质代谢过程的负调芁 Oxylipin biosynthetic process, 羟脂素生物合成过稊 Thylakoid, 类囊佒 Thylakoid part, 部分类囊佒 Photosynthetic membrane, 光合膛 Photosystem, 光系绞 Photosystem II, 光系统II; Thylakoid membrane, 类囊体膜; Photosystem I, 光系统I; Chloroplast thylakoid, 叶绿体类囊体膛 Plastid thylakoid, 质体类囊佒 Oxidoreductase activity, 氧化还原酶活? Endopeptidase inhibitor activity, 肽链内切酶抑制剂活? Peptidase inhibitor activity, 肽酶抑制剂活? Endopeptidase regulator activity, 肽链内切酶调节活? Peptidase regulator activity, 肽酶调节活? Tetrapyrrole binding, 四吡咯结吇 Enzyme inhibitor activity, 酶抑制剂活? Microtubule-based movement, 微管运动; Movement of cell or subcellular component, 细胞或亚细胞组分的运? DNA replication initiation, DNA复制起始; Microtubule-based process, 微管过程; Regulation of cell cycle process, 细胞周期过程的调? Mitotic cell cycle process, 有丝分裂细胞周期过程; Regulation of mitotic cell cycle, 有丝分裂细胞周期调控; Regulation of cell cycle phase transition, 细胞周期进程的调? Cell cycle process, 细胞周期过程; Mitotic cell cycle phase transition, 有丝分裂细胞周期的转受 Cell cycle phase transition, 细胞周期; Mitotic cell cycle, 有丝分裂细胞周期; Kinesin complex, 驱动蛋白复合佒 Microtubule associated complex, 微管相关复合? Microtubule cytoskeleton, 微管细胞骨架; Intrinsic component of plasma membrane, 内源性质膜组仵 Cytoskeletal part, 部分细胞骨架; Cytoskeleton, 细胞骨架; Plasma membrane part, 质膜部分; Integral component of plasma membrane, 质膜整体组分; DNA packaging complex, DNA包装复合? Protein-DNA complex, 蛋白? DNA复合? Microtubule motor activity, 微管运动活? Motor activity, 肌动活动; Cytoskeletal protein binding, 细胞骨架蛋白结合; Microtubule binding, 微管结合; Tubulin binding, 微管蛋白结合; Adenyl ribonucleotide binding, 腺苷核糖核酸结合; Adenyl nucleotide binding, 腺苷核苷酸结吇 Number of genes, 基因数目、/p>
Figure 3.GO function enrichment of differential genes
?nbsp; 4差异基因KEGG富集分析
Alanine, aspartate and glutamate metabolism, 丙氨酸、天门冬氨酸和谷氨酸代谢; Biosynthesis of secondary metabolites, 次生代谢产物的生物合戏 Cyanoamino acid metabolism, 氰氨基酸代谢; Cysteine and methionine metabolism, 半胱氨酸和蛋氨酸代谢; Degradation of aromatic compounds, 芳香族化合物的降觢 Glycine, serine and threonine metabolism, 甘氨酸、丝氨酸和苏氨酸代谢; Glyoxylate and dicarboxylate metabolism, 乙醛酸和二羧酸盐代谢; Isoquinoline alkaloid biosynthesis, 喹啉生物碱生物合戏 Linoleic acid metabolism, 亚油酸代谡 Metabolic pathways, 代谢途径; Phenylalanine metabolism, 苯丙氨酸代谢; Phenylpropanoid biosynthesis, 苯丙烷生物合戏 Photosynthesis, 光合作用; Photosynthesis-antenna proteins, 光合作用蛋白; Plant hormone signal transduction, 植物激素信号转寻 Sesquiterpenoid and triterpenoid biosynthesis, 倍半萜和三萜生物合成; Starch and sucrose metabolism, 淀粉与蔗糖代谢; Tropane, piperidine and pyridine alkaloid biosynthesis, 托烷、哌啶和吡啶生物碱的生物合成; Tyrosine metabolism, 酪氨酸代谡 Ubiquinone and other terpenoid-quinone biosynthesis, 泛醌及其他萜类醌生物合成;Gene number, 基因个数、/p>
Figure 4.KEGG enrichment analysis of differentially expressed genes
?nbsp; 5苯丙素的生物代谢途径
Caffeoyl-CoA, 咖啡酰辅酶A; P-Coumaroyl-CoA, P-香豆酰辅酶A; 4-Coumaroyl-CoA, 4-香豆酷 Trans-Cinnamate, 反式肉桂酷 Phenylpyruvate, 苯丙酮酸; L-Phenylalanine, L-苯丙氨酸; Feruloyl-Coa, 阿魏酰辅酶A; 2-Hydroxy-3-phenylpropenoate, 2-羟基-3-苯基丙酸? Phenylacetaldehyde, 苯乙醚 2- Phenyl acetamide, 2-苯基乙酰胹 Caffeoyl-CoA O-methyltransferase, 咖啡酰辅酶A甲基转移酵 Phenylalanine ammonia-lyase, 苯丙氨酸解氨酵 Trans-cinnamate 4-monooxygenase, 肉桂?-加氧酵 Trans-feruloyl-CoA synthase, 反式阿魏酰辅酶A合成酵 MIF family protein, MIF蛋白家族; Transaminase, 转氨酵 Peroxidase, 过氧化物酵 Amine oxidase, 胺氧化酶
蓝色方框代表上调和下调的基因;红色方框代表上调基因;绿色方框代表下调基因、/p>
Figure 5.Phenylalanine metabolism pathway
The blue block indicates up and down regulated genes, the red block indicates up-regulated genes, and the green block indicates down-regulated genes.
?nbsp; 2显著性差异表达基因的统计分析
Table 2.Statistical analysis of significantly differentialby expressed genes
log2x | 上调基因数目 Up-regulated gene number/% |
下调基因数目 Down-regulated gene number/% |
>2 | 2 363 | 2 102 |
2~5 | 1 680(71.1%) | 1 735(82.5%) |
5~10 | 623(26.4%) | 346(16.4%) |
10 | 60(2.5%) | 21(1.0%) |
?nbsp; 3差异表达的部分基因的功能分析
Table 3.Functional analysis of differentially expressed genes
类别 Category | 基因ID Gene ID | log2x | P值i>Pvalue | 描述 Description |
下调转录因子 Down-regulate transcription factors |
||||
AP2-EREBP | POPTR_0002s16900 | -5.096 41 | 1.89×10-16 | pathogenesis-related transcriptional factor/ERF |
POPTR_0003s13910 | -2.269 73 | 6.91×10-7 | ethylene-responsive transcription factor | |
POPTR_0003s17830 | -2.639 41 | 2.53×10-8 | ethylene-responsive transcription factor ERF003 | |
POPTR_0006s10510 | -4.754 64 | 3.82×10-16 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0006s27710 | -2.946 40 | 1.28×10-10 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0010s22320 | -4.569 17 | 3.88×10-10 | ethylene-responsive transcription factor | |
POPTR_0014s01260 | -2.150 90 | 7.90×10-6 | AP2-like ethylene-responsive transcription factor | |
POPTR_0014s09020 | -2.835 97 | 1.14×10-5 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0001s18800 | -3.404 59 | 2.42×10-5 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0004s05110 | -4.306 81 | 5.75×10-5 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0017s04540 | -2.237 32 | 2.56×10-7 | pathogenesis-related transcriptional factor/ERF | |
AUX/IAA | POPTR_0002s10880 | -2.836 41 | 1.22×10-10 | putative indoleacetic acid-induced protein 8 (IAA8) |
POPTR_0006s06550 | -10.671 2 | 1.78×10-19 | aux/IAA protein | |
POPTR_0008s16100 | -5.260 87 | 2.35×10-24 | aux/IAA protein | |
POPTR_0010s08890 | -3.235 68 | 1.65×10-12 | aux/IAA protein | |
POPTR_0018s14300 | -4.437 79 | 1.83×10-19 | auxin response factor | |
POPTR_0008s17220 | -3.372 51 | 3.01×10-12 | aux/IAA protein | |
POPTR_0018s12790 | -3.539 40 | 5.30×10-12 | aux/IAA protein | |
POPTR_0001s17780 | -8.999 63 | 2.45×10-10 | aux/IAA protein | |
POPTR_0013s03860 | -4.137 51 | 5.19×10-18 | putative auxin-induced protein IAA4 | |
bHLH | POPTR_0001s09450 | -2.155 17 | 5.94×10-7 | Helix--loop-helix DNA-binding |
POPTR_0002s05510 | -3.028 3 | 1.42×10-9 | transcription factor TT8 | |
POPTR_0005s06220 | -4.140 25 | 2.93×10-16 | transcription factor HEC3 | |
POPTR_0006s03560 | -2.099 8 | 3.58×10-6 | Helix--loop-helix DNA-binding | |
POPTR_0006s07440 | -2.278 97 | 4.65×10-7 | Helix--loop-helix DNA-binding | |
POPTR_0004s05490 | -3.654 06 | 2.25×10-11 | Helix--loop-helix DNA-binding | |
POPTR_0001s31250 | -8.825 50 | 1.84×10-9 | Helix--loop-helix DNA-binding | |
POPTR_0001s19250 | -3.213 79 | 2.87×10-9 | Helix--loop-helix DNA-binding | |
POPTR_0017s07520 | -2.338 43 | 7.97×10-8 | Helix--loop-helix DNA-binding | |
POPTR_0008s19510 | -4.875 90 | 6.40×10-7 | Helix--loop-helix DNA-binding | |
POPTR_0018s13840 | -3.509 27 | 1.12×10-5 | Helix--loop-helix DNA-binding | |
POPTR_0006s05640 | -2.208 79 | 5.49×10-5 | Helix--loop-helix DNA-binding | |
POPTR_0018s13850 | -4.660 67 | 9.43×10-18 | Helix-loop-helix DNA-binding | |
MYB | POPTR_0018s10390 | -9.739 11 | 5.66×10-14 | SANT domain, DNA binding; transcription regulator HTH, MYB-type |
POPTR_0003s14420 | -4.532 38 | 5.50×10-10 | SANT domain, DNA binding; transcription regulator HTH, MYB-type | |
POPTR_0002s18170 | -3.791 69 | 1.08×10-15 | MYB-related transcription factor LHY | |
POPTR_0003s11360 | -3.745 86 | 3.77×10-12 | putative MYB family transcription factor (MYB85) | |
POPTR_0019s07760 | -3.707 5 | 1.80×10-14 | putative transcription factor MYB101 | |
POPTR_0015s13180 | -2.902 47 | 2.73×10-6 | MYB-like DNA-binding protein | |
POPTR_0012s14540 | -2.768 56 | 1.14×10-7 | transcription regulator HTH, Myb-type, DNA-binding | |
POPTR_0006s25840 | -2.751 47 | 4.98×10-9 | putative C-MYB-like transcription factor (MYB3R2) | |
POPTR_0002s13030 | -2.661 68 | 1.21×10-6 | MYB-like DNA-binding domain | |
POPTR_0006s09860 | -2.535 63 | 9.87×10-7 | MYB-like DNA-binding domain | |
POPTR_0006s18620 | -2.363 55 | 2.33×10-6 | MYB-like DNA-binding domain | |
POPTR_0007s15110 | -2.262 71 | 5.78×10-7 | MYB-CC type transcription factor | |
POPTR_0012s03530 | -3.690 53 | 3.23×10-13 | MYB-like DNA-binding domain | |
MYB-like DNA-binding domain | ||||
POPTR_0011s04010 | -7.828 67 | 1.09×10-5 | MYB-like DNA-binding domain | |
MYB-like DNA-binding domain | ||||
POPTR_0004s08480 | -4.162 95 | 4.56×10-12 | MYB-like DNA-binding domain | |
POPTR_0010s13290 | -4.807 59 | 3.48×10-9 | MYB-like DNA-binding domain | |
POPTR_0009s01270 | -2.384 50 | 6.88×10-6 | MYB-like DNA-binding domain | |
POPTR_0002s11440 | -2.047 54 | 3.90×10-6 | MYB-like DNA-binding domain | |
WRKY | POPTR_0012s10290 | -2.007 31 | 7.54×10-6 | WRKY transcription factor 75 |
POPTR_0014s15320 | -2.914 72 | 2.59×10-10 | DNA-binding WRKY | |
POPTR_0005s08720 | -2.860 66 | 2.57×10-9 | DNA-binding WRKY | |
POPTR_0005s05700 | -2.077 97 | 4.79×10-6 | DNA-binding WRKY | |
下调基因 Down-regulate genes |
||||
乙酰化相兲/td> | POPTR_0009s07820 | -11.523 24 | 4.84×10-25 | GNAT5-related n-acetyltransferase (GNAT) family protein; similar to GNAT family |
Acetylation related | POPTR_0019s01520 | -5.006 67 | 9.72×10-18 | shikimate O-hydroxycinnamoyl transferase |
POPTR_0004s05280 | -2.038 49 | 1.85×10-6 | transferase family protein; similar to elicitor inducible gene product EIG-i24 | |
木质素合戏/td> | POPTR_0014s14310 | -5.919 72 | 1.52×10-27 | xyloglucan endo-transglycosylase, C-terminal |
Lignin synthesis | POPTR_0008s03810 | -2.516 21 | 7.35×10-9 | phenylalanine ammonia-lyase |
POPTR_0019s14590 | -5.195 90 | 1.12×10-25 | xyloglucan endotransglucosylase/hydrolase | |
POPTR_0004s02030 | -2.352 01 | 2.70×10-6 | xyloglucan endotransglucosylase/hydrolase | |
POPTR_0013s14860 | -2.062 34 | 1.41×10-6 | xyloglucan endotransglucosylase/hydrolase | |
POPTR_0010s23100 | -2.013 57 | 6.39×10-6 | phenylalanine/histidine ammonia-lyases, active site; phenylalanine ammonia-lyase | |
纤维素合戏/td> | POPTR_0003s14230 | -2.656 26 | 2.28×10-9 | cellulose synthase |
Cellulose synthesis | POPTR_0002s20130 | -3.850 09 | 1.20×10-8 | cellulose synthase |
POPTR_0014s12000 | -2.448 48 | 3.08×10-7 | cellulose synthase | |
上调转录因子 Up-regulate transcription factors |
||||
AP2-EREBP | POPTR_0003s15060 | 3.926 373 | 1.82×10-13 | ethylene-responsive transcription factor ERF106 |
POPTR_0003s07910 | 6.005 648 | 9.03×10-30 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0001s15390 | 2.893 319 | 1.39×10-10 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0006s23480 | 4.311 008 | 5.06×10-10 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0009s10470 | 4.597 455 | 1.10×10-9 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0015s13830 | 4.803 138 | 3.96×10-8 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0002s08610 | 2.231 947 | 4.25×10-7 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0003s13610 | 3.464 754 | 2.20×10-6 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0001s15550 | 3.183 902 | 5.26×10-6 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0014s09540 | 9.120 961 | 1.63×10-11 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0006s14100 | 4.137 601 | 1.77×10-8 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0002s06620 | 2.297 645 | 1.35×10-7 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0017s08250 | 2.551 527 | 2.38×10-6 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0012s13880 | 2.173 311 | 4.10×10-5 | pathogenesis-related transcriptional factor/ERF | |
POPTR_0005s08940 | 2.850 637 | 1.40×10-9 | pathogenesis-related transcriptional factor/ERF | |
bHLH | POPTR_0005s22870 | 5.416 638 | 8.03×10-14 | helix-loop-helix DNA-binding |
POPTR_0004s02870 | 4.947 659 | 2.29×10-13 | helix-loop-helix DNA-binding | |
POPTR_0001s27680 | 3.088 316 | 6.92×10-12 | helix-loop-helix DNA-binding | |
POPTR_0003s05010 | 3.544 713 | 1.26×10-6 | helix-loop-helix DNA-binding | |
POPTR_0018s09060 | 2.513 479 | 1.75×10-6 | helix-loop-helix DNA-binding | |
POPTR_0001s29400 | 2.408 46 | 1.85×10-6 | helix-loop-helix DNA-binding | |
POPTR_0019s11870 | 2.055 089 | 2.34×10-6 | helix-loop-helix DNA-binding | |
POPTR_0010s14010 | 2.599 038 | 3.95×10-6 | helix-loop-helix DNA-binding | |
POPTR_0010s08760 | 7.719 238 | 5.45×10-6 | helix-loop-helix DNA-binding | |
POPTR_0001s18660 | 2.835 36 | 6.24×10-6 | helix-loop-helix DNA-binding | |
POPTR_0005s04160 | 5.664 689 | 2.00×10-20 | transcription factor bHLH99 | |
MYB | POPTR_0003s06320 | 2.583 688 | 1.47×10-8 | MYB-like DNA-binding protein |
POPTR_0007s14630 | 3.054 572 | 3.85×10-10 | MYB domain protein 87 | |
POPTR_0017s04890 | 3.299 653 | 3.43×10-9 | putative MYB transcription factor | |
POPTR_0001s07830 | 2.490 851 | 3.49×10-8 | MYB-like DNA-binding domain | |
POPTR_0014s11230 | 2.845 941 | 1.04×10-7 | MYB-like DNA-binding domain | |
POPTR_0007s11470 | 3.070 633 | 8.56×10-12 | MYB-like DNA-binding domain | |
POPTR_0017s04720 | 4.004 355 | 2.89×10-17 | MYB-like DNA-binding domain | |
POPTR_0010s18130 | 4.068 391 | 1.50×10-12 | MYB-like DNA-binding domain | |
POPTR_0001s02010 | 6.986 829 | 0.000517 | MYB-like DNA-binding domain | |
POPTR_0018s06410 | 9.007 962 | 5.84×10-11 | MYB-like DNA-binding domain | |
POPTR_0006s15480 | 2.275 316 | 2.63×10-5 | MYB-like DNA-binding domain | |
POPTR_0005s21420 | 4.377 921 | 1.70×10-17 | MYB-like DNA-binding domain | |
POPTR_0016s12430 | 2.263 672 | 1.01×10-6 | MYB-CC type transcription factor | |
POPTR_0006s10190 | 2.025 607 | 8.49×10-6 | MYB-CC type transcription factor | |
POPTR_0001s22660 | 5.347 404 | 1.52×10-10 | MYB-CC type transcription factor | |
POPTR_0004s02570 | 5.778 901 | 1.25×10-9 | MYB-CC type transcription factor | |
POPTR_0006s12400 | 4.105 249 | 2.30×10-8 | MYB-CC type transcription factor | |
POPTR_0005s24550 | 2.524 575 | 3.04×10-8 | MYB-CC type transcription factor | |
POPTR_0011s12750 | 3.745 664 | 1.47×10-5 | MYB-CC type transcription factor | |
POPTR_0002s07440 | 3.708 866 | 5.67×10-13 | MYB-like DNA-binding protein | |
POPTR_0001s20370 | 4.142 885 | 9.88×10-14 | MYB-like DNA-binding domain | |
POPTR_0009s03240 | 4.551 641 | 1.71×10-16 | putative MYB family transcription factor MYB59 | |
POPTR_0008s16660 | 6.760 851 | 7.71×10-20 | MYB-like DNA-binding domain | |
POPTR_0011s04120 | 7.339 587 | 4.98×10-26 | MYB transcription factor-related | |
POPTR_0017s04720 | 4.004 355 | 2.89×10-17 | MYB-like DNA-binding domain | |
POPTR_0009s03990 | 2.642 05 | 3.19×10-9 | MYB-like DNA-binding domain | |
WRKY | POPTR_0001s10490 | 3.049 334 | 8.40×10-10 | putative WRKY transcription factor 41 |
POPTR_0001s13600 | 2.678 04 | 1.89×10-9 | putative WRKY transcription factor 45 | |
POPTR_0001s13610 | 3.055 109 | 5.18×10-11 | putative WRKY transcription factor | |
POPTR_0002s16590 | 2.778 68 | 7.05×10-10 | WRKY transcription factor 22 | |
POPTR_0003s13840 | 3.925 765 | 1.27×10-14 | putative WRKY transcription factor 53 | |
POPTR_0003s18060 | 4.696 985 | 2.94×10-21 | putative WRKY transcription factor 40 | |
POPTR_0008s09140 | 4.204 637 | 2.08×10-16 | putative WRKY transcription factor 3 | |
POPTR_0015s07530 | 2.614 523 | 3.20×10-9 | DNA-binding WRKY | |
POPTR_0015s11130 | 2.538 428 | 6.01×10-9 | WRKY transcription factor 75 | |
POPTR_0017s11570 | 3.024 346 | 1.44×10-10 | putative WRKY transcription factor 72 | |
POPTR_0002s21330 | 5.191 626 | 1.31×10-12 | DNA-binding WRKY | |
POPTR_0003s16750 | 3.001 877 | 2.79×10-11 | DNA-binding WRKY | |
POPTR_0001s34520 | 2.472 224 | 1.91×10-8 | DNA-binding WRKY | |
POPTR_0016s13600 | 2.270 756 | 2.06×10-7 | DNA-binding WRKY | |
POPTR_0002s19630 | 2.314 696 | 2.31×10-7 | DNA-binding WRKY | |
POPTR_0001s09900 | 2.442 682 | 1.90×10-6 | DNA-binding WRKY | |
POPTR_0019s14460 | 2.760 178 | 5.27×10-10 | WRKY transcription factor 25 | |
上调基因 Up-regulate genes |
||||
乙酰化相兲/td> | POPTR_0005s18970 | 6.099 277 | 7.99×10-16 | GCN5-related N-acetyltransferase (GNAT) domain |
Acetylation related | POPTR_0007s13930 | 2.380 817 | 3.83×10-8 | Histone H1/H5 |
POPTR_0006s01190 | 2.205 723 | 5.79×10-7 | chloramphenicol acetyltransferase-like domain | |
POPTR_0016s11990 | 2.709 516 | 4.48×10-6 | chloramphenicol acetyltransferase-like domain | |
POPTR_0008s15450 | 3.704 659 | 9.50×10-14 | GCN5-related N-acetyltransferase (GNAT) domain | |
POPTR_0003s18090 | 3.476 053 | 3.90×10-7 | GCN5-related N-acetyltransferase (GNAT) domain | |
POPTR_0010s06380 | 3.686 076 | 8.04×10-14 | chloramphenicol acetyltransferase-like domain | |
POPTR_0010s19360 | 2.671 295 | 1.16×10-7 | chloramphenicol acetyltransferase-like domain | |
POPTR_0019s14700 | 2.592 051 | 1.44×10-6 | chloramphenicol acetyltransferase-like domain | |
POPTR_0018s11840 | 7.567 995 | 1.27×10-5 | chloramphenicol acetyltransferase-like domain | |
POPTR_0010s06390 | 7.306 48 | 7.55×10-5 | chloramphenicol acetyltransferase-like domain | |
POPTR_0005s11860 | 2.582 812 | 3.05×10-9 | Histone H5 | |
细胞周期 | POPTR_0008s08890 | 4.544 545 | 3.32×10-16 | cell cycle and apoptosis regulator protein |
Cell cyclin | POPTR_0008s08880 | 5.080 659 | 7.40×10-7 | cell cycle and apoptosis regulator protein |
POPTR_0002s12450 | 2.348 594 | 8.65×10-8 | cyclin-like | |
POPTR_0002s11980 | 4.406 009 | 7.55×10-5 | cyclin-like | |
POPTR_0001s45630 | 4.777 505 | 3.77×10-13 | F-box domain, cyclin-like | |
POPTR_0011s01490 | 3.731 533 | 3.69×10-12 | F-box domain, cyclin-like | |
POPTR_0009s05230 | 2.808 402 | 1.65×10-9 | F-box domain, cyclin-like | |
POPTR_0006s22490 | 2.553 471 | 3.17×10-8 | F-box domain, cyclin-like | |
POPTR_0003s19730 | 2.329 87 | 6.76×10-8 | F-box domain, cyclin-like | |
木质素合戏/td> | POPTR_0006s07060 | 2.624 056 | 1.87×10-9 | xyloglucan endotransglucosylase/hydrolase |
Lignin synthesis | POPTR_0007s14570 | 4.197 216 | 9.25×10-18 | xyloglucan endotransglucosylase/hydrolase |
POPTR_0002s06120 | 3.670 01 | 4.53×10-13 | xyloglucan endotransglucosylase/hydrolase | |
POPTR_0003s09590 | 3.004 086 | 1.75×10-11 | xyloglucan endotransglucosylase/hydrolase | |
POPTR_0005s22300 | 2.032 963 | 1.03×10-5 | xyloglucan endotransglucosylase/hydrolase | |
POPTR_0001s07100 | 8.394 74 | 2.93×10-8 | xyloglucan fucosyltransferase | |
POPTR_0001s07130 | 2.411 038 | 3.25×10-7 | xyloglucan fucosyltransferase | |
POPTR_0018s10300 | 4.105 44 | 9.51×10-14 | xyloglucan endo-transglycosylase, C-terminal | |
纤维素合戏/td> | POPTR_0011s07040 | 2. 549 334 | 2.01×10-5 | cellulose synthase |
Cellulose synthesis | POPTR_0009s17100 | 4.878 897 | 1.65×10-8 | cellulose synthase |